BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023A04SP1|AL427982
(1045 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1713 859 0.0
3x_Contig296 553 e-157
>3x_Contig1713
Length = 18539
Score = 859 bits (433), Expect = 0.0
Identities = 468/479 (97%), Gaps = 1/479 (0%)
Strand = Plus / Minus
Query: 567 taccggaatgatagcgtagatttcctttctaattataatgtttttgttttctctgtatct 626
||||||| ||||| || ||||| | |||| ||||||||||||||||||||||||||||||
Sbjct: 18539 taccggattgatatcggagattccttttcgaattataatgtttttgttttctctgtatct 18480
Query: 627 catagtagtctcatatatctcttcgaatttgtccttcaaatatccaccttccaatgatac 686
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 18479 catagtagtgtcatatatctcttcgaatttgtccgtcaaatatccaccttccaatgatac 18420
Query: 687 caactgtctataaaccaacaatgtaccatgtatggaaacagtactattgagttgtaatcc 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18419 caactgtctataaaccaacaatgtaccatgtatggaaacagtactattgagttgtaatcc 18360
Query: 747 atatatgcatccattaaatagtctttgaacccatttcttcgtcagagaggaatcacggtt 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18359 atatatgcatccattaaatagtctttgaacccatttcttcgtcagagaggaatcacggtt 18300
Query: 807 attaatgatagtcaaacattttcccaatgtgacagatgcatctgttctaattacaagttt 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18299 attaatgatagtcaaacattttcccaatgtgacagatgcatctgttctaattacaagttt 18240
Query: 867 tgtatctctcaacgctctccaaatgttatccaagattgaattcacaaatggatatagtag 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18239 tgtatctctcaacgctctccaaatgttatccaagattgaattcacaaatggatatagtag 18180
Query: 927 atatggagaattatcagcaattgcactgataattaataaagatgcatgtttcctatattc 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18179 atatggagaattatcagcaattgcactgataattaataaagatgcatgtttcctatattc 18120
Query: 987 ttgttttgaattcgatgaggagttttctggagawgtgggcaa-cactcaatgcatgttt 1044
||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 18119 ttgttttgaattcgatgaggagttttctggagatgtggtcaaccactcaatgcatgttt 18061
>3x_Contig296
Length = 1333
Score = 553 bits (279), Expect = e-157
Identities = 279/279 (100%)
Strand = Plus / Plus
Query: 1 attggcttcaccagttttcttgaagagtgattgatctctataatttcttgcggtctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 attggcttcaccagttttcttgaagagtgattgatctctataatttcttgcggtctctgc 1114
Query: 61 ggagaatggtttcataggggtaggggatcccggtggtctgaacttctcaccagatagtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 ggagaatggtttcataggggtaggggatcccggtggtctgaacttctcaccagatagtac 1174
Query: 121 aagacatattatattgagtagcttttcattgattgttccctccaacgaagggattttctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 aagacatattatattgagtagcttttcattgattgttccctccaacgaagggattttctc 1234
Query: 181 gcatacaatcagtaaggtctcttgcatgtgatcacttaaagggcatgctaacatatattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1235 gcatacaatcagtaaggtctcttgcatgtgatcacttaaagggcatgctaacatatattc 1294
Query: 241 aagtagtcctctgtttagatattttgctaataatggacg 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1295 aagtagtcctctgtttagatattttgctaataatggacg 1333
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8126
Number of Sequences: 1807
Number of extensions: 8126
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 2
length of query: 1045
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1029
effective length of database: 10,329,639
effective search space: 10629198531
effective search space used: 10629198531
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)